Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs7034162
rs7034162
0.020 GeneticVariation BEFREE Single-nucleotide polymorphism rs7034162 was associated with metastasis of osteosarcoma in the Chinese population possibly via downregulation of <i>NFIB</i>. 31522615

2019

dbSNP: rs4730222
rs4730222
0.010 GeneticVariation BEFREE We show that the most significant SNP, rs4730222, exhibits differential nuclear protein binding in electrophoretic mobility shift assays and drives increased expression of an alternative isoform of HBP1 in a heterozygote chondrosarcoma cell line, in a CRISPR-edited osteosarcoma cell line, and in chondrocytes derived from osteoarthritis patients. 31164647

2019

dbSNP: rs1215600806
rs1215600806
0.010 GeneticVariation BEFREE Plasmids created for mutants 1 c.110T>C (L37P), 2 c.532T>C (Y178H) and 3 c.715G>T (D239Y) using in vitro mutagenesis were transfected into human osteosarcoma (U<sub>2</sub>OS) cells and compared to wildtype (WT) and mock cDNA. 31146036

2019

dbSNP: rs1215600806
rs1215600806
0.010 GeneticVariation BEFREE Plasmids created for mutants 1 c.110T>C (L37P), 2 c.532T>C (Y178H) and 3 c.715G>T (D239Y) using in vitro mutagenesis were transfected into human osteosarcoma (U<sub>2</sub>OS) cells and compared to wildtype (WT) and mock cDNA. 31146036

2019

dbSNP: rs1416572796
rs1416572796
0.010 GeneticVariation BEFREE Plasmids created for mutants 1 c.110T>C (L37P), 2 c.532T>C (Y178H) and 3 c.715G>T (D239Y) using in vitro mutagenesis were transfected into human osteosarcoma (U<sub>2</sub>OS) cells and compared to wildtype (WT) and mock cDNA. 31146036

2019

dbSNP: rs143358506
rs143358506
0.010 GeneticVariation BEFREE Plasmids created for mutants 1 c.110T>C (L37P), 2 c.532T>C (Y178H) and 3 c.715G>T (D239Y) using in vitro mutagenesis were transfected into human osteosarcoma (U<sub>2</sub>OS) cells and compared to wildtype (WT) and mock cDNA. 31146036

2019

dbSNP: rs143358506
rs143358506
0.010 GeneticVariation BEFREE Plasmids created for mutants 1 c.110T>C (L37P), 2 c.532T>C (Y178H) and 3 c.715G>T (D239Y) using in vitro mutagenesis were transfected into human osteosarcoma (U<sub>2</sub>OS) cells and compared to wildtype (WT) and mock cDNA. 31146036

2019

dbSNP: rs764191858
rs764191858
0.010 GeneticVariation BEFREE Plasmids created for mutants 1 c.110T>C (L37P), 2 c.532T>C (Y178H) and 3 c.715G>T (D239Y) using in vitro mutagenesis were transfected into human osteosarcoma (U<sub>2</sub>OS) cells and compared to wildtype (WT) and mock cDNA. 31146036

2019

dbSNP: rs779591039
rs779591039
0.010 GeneticVariation BEFREE Plasmids created for mutants 1 c.110T>C (L37P), 2 c.532T>C (Y178H) and 3 c.715G>T (D239Y) using in vitro mutagenesis were transfected into human osteosarcoma (U<sub>2</sub>OS) cells and compared to wildtype (WT) and mock cDNA. 31146036

2019

dbSNP: rs1273593548
rs1273593548
0.010 GeneticVariation BEFREE <b>Methods:</b> Osteosarcoma cancer cell line MG-63 was transfected with Ras gene with G12V and Y40C site mutation. 31126199

2019

dbSNP: rs367597251
rs367597251
0.010 GeneticVariation BEFREE <b>Methods:</b> Osteosarcoma cancer cell line MG-63 was transfected with Ras gene with G12V and Y40C site mutation. 31126199

2019

dbSNP: rs756673959
rs756673959
0.010 GeneticVariation BEFREE <b>Methods:</b> Osteosarcoma cancer cell line MG-63 was transfected with Ras gene with G12V and Y40C site mutation. 31126199

2019

dbSNP: rs1128503
rs1128503
0.020 GeneticVariation BEFREE The <i>ABCB1</i> (C1236T) polymorphism affects P-gp-mediated transport of osteosarcoma drugs in a drug-specific way. 30977678

2019

dbSNP: rs1042522
rs1042522
0.040 GeneticVariation BEFREE In the present meta-analysis, we aimed to elucidate the associations of TP53 rs1042522 genetic polymorphism with the risk of osteosarcoma or Ewing sarcoma. 30833364

2019

dbSNP: rs3217992
rs3217992
0.010 GeneticVariation BEFREE RESULTS An allele of the SNP rs3217992 is predictive for susceptibility to osteos</span>arcoma, and it is associated with poorer prognosis of osteos</span>arcoma. 30774116

2019

dbSNP: rs770771727
rs770771727
0.010 GeneticVariation BEFREE Fresh mitochondria isolated from homeoplasmic 143B osteosarcoma cybrids containing mitochondrial DNA (mtDNA) derived from health individuals (Mito) or mtDNA with the A8344G mutation (Mito<sup>8344</sup>) were conjugated with cell-penetrating peptide Pep-1 (P-Mito) or not conjugated prior to cell co-culture. 30674338

2019

dbSNP: rs1799793
rs1799793
0.100 GeneticVariation BEFREE This study did not support rs11615, rs13181 or rs1799793 to be used as surrogate markers for clinical outcome of osteosarcoma with chemotherapy. 30544402

2018

dbSNP: rs13181
rs13181
0.080 GeneticVariation BEFREE This study did not support rs11615, rs13181 or rs1799793 to be used as surrogate markers for clinical outcome of osteosarcoma with chemotherapy. 30544402

2018

dbSNP: rs861539
rs861539
0.040 GeneticVariation BEFREE XRCC3 Thr241Met gene polymorphism was associated with osteosarcoma risk, but XRCC3 Thr241Met CC genotype was not associated with Enneking stage, tumor location, and tumor metastasis. 30539867

2018

dbSNP: rs1799782
rs1799782
0.010 GeneticVariation BEFREE Besides, no significant association of rs25487, rs1799782, and rs25489 with OS was observed. 30464596

2018

dbSNP: rs25489
rs25489
0.010 GeneticVariation BEFREE Besides, no significant association of rs25487, rs1799782, and rs25489 with OS was observed. 30464596

2018

dbSNP: rs3213245
rs3213245
0.010 GeneticVariation BEFREE In conclusion, these findings revealed that XRCC1 rs3213245 polymorphism was associated with increased risk of OS, which could affect XRCC1 expression in vitro and in vivo. 30464596

2018

dbSNP: rs11615
rs11615
0.100 GeneticVariation BEFREE The ERCC2-rs1799793 AA+AC > CC (OR=1.3428, 95% CI=1.0201; 1.7674) had an effect on the risk of osteosarcoma development, whereas, there were no significant associations among the other ERCC SNPs (ERCC1 rs3212986, ERCC1 rs11615, and ERCC2 rs13181) and osteosarcoma. 30402838

2018

dbSNP: rs1799793
rs1799793
0.100 GeneticVariation BEFREE The ERCC2 rs1799793 polymorphism is related to the high risk of osteosarcoma development. 30402838

2018

dbSNP: rs13181
rs13181
0.080 GeneticVariation BEFREE The ERCC2-rs1799793 AA+AC > CC (OR=1.3428, 95% CI=1.0201; 1.7674) had an effect on the risk of osteosarcoma development, whereas, there were no significant associations among the other ERCC SNPs (ERCC1 rs3212986, ERCC1 rs11615, and ERCC2 rs13181) and osteosarcoma. 30402838

2018